The Qarabağ 2013-14 season was Qarabağ's thirteenth Azerbaijan Premier League season, and their sixth season under manager Gurban Gurbanov. They reached the Quarterfinals of the Azerbaijan Cup, losing to Gabala, and they were crowned Champions of the Premier League. Qarabağ also competed in the 2013–14 UEFA Europa League entering at the 1st qualifying round stage. They defeated Metalurg Skopje of Macedonia, Piast Gliwice of Poland and Gefle of Sweden on their way to the playoff round where they were knocked out by Eintracht Frankfurt of Germany.

Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.

In: Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.

Out: Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.

In: Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.

Out: Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.