Christianity in the 17th century showed both deep conflict and new tolerance. The Age of Enlightenment grew to challenge Christianity as a whole, generally elevated human reason above divine revelation, and down-graded religious authorities such as the Papacy based on it. Major conflicts with strong religious elements arose, particularly in Central Europe with the Thirty Years' War, and in Northwestern Europe with the Wars of the Three Kingdoms. Partly out of weariness with conflict, greater religious tolerance developed. In the Protestant world there was persecution of Arminians and religious Independents, such as early Unitarians, Baptists and Quakers. In the Catholic world, Rome attempted to fend off Gallicanism and Conciliarism, views which threatened the Papacy and structure of the church.
Missionary activity in Asia and the Americas grew strongly, put down roots, and developed its institutions, though it met with strong resistance in Japan in particular. At the same time Christian colonization of some areas outside Europe succeeded, driven by economic as well as religious reasons. Christian traders were heavily involved in the Atlantic slave trade, which had the effect of transporting Africans into Christian communities. A land war between Christianity and Islam continued, in the form of the campaigns of the Habsburg Empire and Ottoman Empire in the Balkans, a turning point coming at Vienna in 1683. The Tsardom of Russia, where Orthodox Christianity was the established religion, expanded eastwards into Siberia and Central Asia, regions of Islamic and shamanistic beliefs, and also southwest into the Ukraine, where the Uniate Eastern Catholic Churches arose.