UAP56

DDX39B

Protein BAT1 PDB 1t5i.png

Available structures

Ortholog search: PDBe RCSB

List of PDB id codes
1T5I, 1T6N, 1XTI, 1XTJ, 1XTK

Identifiers

DDX39B, BAT1, D6S81E, UAP56, DEAD-box helicase 39B, DExD-box helicase 39B

External IDs

MGI: 99240 HomoloGene: 48376 GeneCards: DDX39B

Gene ontology
Molecular function	• nucleotide binding • ATP-dependent RNA helicase activity • helicase activity • protein complex binding • U4 snRNA binding • ATP-dependent protein binding • protein binding • nucleic acid binding • hydrolase activity • ATP binding • U6 snRNA binding • RNA-dependent ATPase activity • ATPase activity • identical protein binding • RNA binding
Cellular component	• cytoplasm • transcription export complex • nuclear matrix • U6 snRNP • protein complex • spliceosomal complex • U4 snRNP • nucleus • nucleoplasm • nuclear speck • nucleolus
Biological process	• mRNA splicing, via spliceosome • mRNA transport • negative regulation of DNA damage checkpoint • mRNA processing • viral mRNA export from host cell nucleus • positive regulation of translation • mRNA export from nucleus • positive regulation of DNA-templated transcription, elongation • spliceosomal complex assembly • RNA secondary structure unwinding • RNA splicing • positive regulation of DNA biosynthetic process • liver development • positive regulation of cell growth involved in cardiac muscle cell development • positive regulation of vascular smooth muscle cell proliferation • mRNA 3'-end processing • termination of RNA polymerase II transcription • RNA export from nucleus • transport
Sources:Amigo / QuickGO

RNA expression pattern

PBB GE PNPLA6 203718 at tn.png

More reference expression data

Orthologs

Species

Human

Mouse


7919


53817

ENSG00000198563 ENSG00000225073 ENSG00000237889 ENSG00000229496 ENSG00000215425
ENSG00000235439 ENSG00000225859 ENSG00000230624


ENSMUSG00000019432


Q13838


Q9Z1N5

RefSeq (mRNA)


NM_004640 NM_080598


NM_001252457 NM_019693

RefSeq (protein)


NP_004631 NP_542165


NP_001239386 NP_062667

Location (UCSC)

Chr 6: 31.53 – 31.54 Mb

Chr 17: 35.24 – 35.25 Mb

PubMed search

1T5I, 1T6N, 1XTI, 1XTJ, 1XTK

ENSG00000235439
ENSG00000225859
ENSG00000230624

ENSMUSG00000019432

NM_004640
NM_080598

NM_001252457
NM_019693

NP_004631
NP_542165

NP_001239386
NP_062667

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Wikipedia

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