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Cooperative binding


Molecular binding is an interaction between molecules that results in a stable physical association between those molecules. Cooperative binding occurs in binding systems containing more than one type, or species, of molecule and in which one of the partners is not mono-valent and can bind more than one molecule of the other species.

For example, consider a system where one molecule of species A can bind two molecules of species B. Species A is called the receptor and species B is called the ligand. Binding can be considered "cooperative" if the binding of the first molecule of B to A changes the binding affinity of the second B molecule, making it more or less likely to bind. In other words, the binding of B molecules to the different sites on A do not constitute mutually independent events.

Cooperativity can be positive or negative. Cooperative binding is observed in many biopolymers, including proteins and nucleic acids. Cooperative binding has been shown to be the mechanism underlying a large range of biochemical and physiological processes.

In 1904, Christian Bohr studied hemoglobin binding to oxygen under different conditions. When plotting hemoglobin saturation with oxygen as a function of the partial pressure of oxygen, he obtained a sigmoidal (or "S-shaped") curve, see Figure 1. This indicates that the more oxygen is bound to hemoglobin, the easier it is for more oxygen to bind - until all binding sites are saturated. In addition, Bohr noticed that increasing CO2 pressure shifted this curve to the right - i.e. higher concentrations of CO2 make it more difficult for hemoglobin to bind oxygen. This latter phenomenon, together with the observation that hemoglobin's affinity for oxygen increases with increasing pH, is known as the Bohr effect.

A receptor molecule is said to exhibit cooperative binding if its binding to ligand scales non-linearly with ligand concentration. Cooperativity can be positive (if binding of a ligand molecule increases the receptor's apparent affinity, and hence increases the chance of another ligand molecule binding) or negative (if binding of a ligand molecule decreases affinity and hence makes binding of other ligand molecules less likely). Figure 1 is a chart of the "fractional occupancy" of a receptor with a given ligand, which is defined as the quantity of ligand-bound binding sites divided by the total quantity of ligand binding sites:


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