The Combined DNA Index System (CODIS) is the United States national DNA database created and maintained by the Federal Bureau of Investigation. CODIS consists of three levels of information; Local DNA Index Systems (LDIS) where DNA profiles originate, State DNA Index Systems (SDIS) which allows for laboratories within states to share information, and the National DNA Index System (NDIS) which allows states to compare DNA information with one another.
The CODIS software contains multiple different databases depending on the type of information being searched against. Examples of these databases include, missing persons, convicted offenders, and forensic samples collected from crime scenes. Each state, and the federal system, has different laws for collection, upload, and analysis of information contained within their database. However, for privacy reasons, the CODIS database does not contain any personal identifying information, such as the name associated with the DNA profile. The uploading agency is notified of any hits to their samples and are tasked with the dissemination of personal information pursuant to their laws.
The creation of a national DNA database within the U.S. was first mention by the Technical Working Group on DNA Analysis Methods (TWGDAM) in 1989. In 1990, the FBI began a pilot DNA databasing program with 14 state and local laboratories. In 1994, Congress passed the DNA Identification Act which authorized the FBI to create a national DNA database of convicted offenders as well as separate databases for missing persons and forensic samples collected from crime scenes. The Act also required that laboratories participating in the CODIS program maintain accreditation from an independent nonprofit organization that is actively involved in the forensic fields and that scientists processing DNA samples for submission into CODIS maintain proficiency and are routinely tested to ensure the quality of the profiles being uploaded into the database. The national level of CODIS (NDIS) was implemented in October 1998. Today, all 50 states, the District of Columbia, federal law enforcement, the Army Laboratory, and Puerto Rico participate in national sharing of DNA profiles.
The CODIS database contains several different indexes for the storage of DNA profile information. For assistance in criminal investigations three indexes exist: the offender index, which contains DNA profiles of those convicted of crimes; the arrestee index, which contains profiles of those arrestee of crimes pursuit to the laws of the particular state; and the forensic index, which contains profiles collected from a crime scene. Additional indexes, such as the unidentified human remain index, the missing persons index, and the biological relatives of missing persons index, are used to assist in identifying missing persons. Specialty indexes also exist for other specimens that don't fall into the other categories. These indexes include the staff index, for profiles of employees who work with the samples, and the multi-allelic offender index, for single-source samples that have three or more alleles at two or more loci.