The 2006–07 season was the 96th season in Hajduk Split’s history and their sixteenth in the Prva HNL. Their 5th place finish in the 2005–06 season meant it was their 16th successive season playing in the Prva HNL.

Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.

Updated to games played on 19 May 2007.
Source: prva-hnl.hr (Croatian)
Rules for classification: 1) points; 2) goal difference; 3) number of goals scored
¹Qualified for Europe as 2006–07 Croatian Football Cup finalists.
²Kamen Ingrad were docked 2 points.
(C) = Champion; (R) = Relegated; (P) = Promoted; (E) = Eliminated; (O) = Play-off winner; (A) = Advances to a further round.
Only applicable when the season is not finished:
(Q) = Qualified to the phase of tournament indicated; (TQ) = Qualified to tournament, but not yet to the particular phase indicated; (RQ) = Qualified to the relegation tournament indicated; (DQ) = Disqualified from tournament.

Last updated: 19 May 2007.
Source: Sportnet.hr

Last updated: 19 May 2007.
Source: Competitive matches
Ground: A = Away; H = Home. Result: D = Draw; L = Loss; W = Win; P = Postponed.

Source: 2006–07 Croatian First Football League article

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