The 2003–04 season was the 93rd season in Hajduk Split’s history and their 13th in the Prva HNL. Their second place finish in the 2002–03 season meant it was their 13th successive season playing in the Prva HNL.

Note: Flags indicate national team as defined under FIFA eligibility rules. Players may hold more than one non-FIFA nationality.

Updated to games played on 20 March 2004.
Source: RSSSF.com
1 ^{^} The home team is listed in the left-hand column.
Colours: Blue = home team win; Yellow = draw; Red = away team win.

Updated to games played on 15 May 2004.
Source: RSSSF.com
1 ^{^} The home team is listed in the left-hand column.
Colours: Blue = home team win; Yellow = draw; Red = away team win.

Last updated: 15 May 2004.
Source: Sportnet.hr

Last updated: 15 May 2004.
Source: Competitive matches
Ground: A = Away; H = Home. Result: D = Draw; L = Loss; W = Win; P = Postponed.

Source: 2003–04 Croatian First Football League article

Source: hajduk.hr

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