List of sequenced plant genomes

This list of sequenced plant genomes contains plant species known to have publicly available complete genome sequences that have been assembled, annotated and published. Unassembled genomes are not included, nor are organelle only sequences. For all kingdoms, see the list of sequenced genomes.

Unicellular photosynthetic eukaryotes.

scaffold N50 16.2 Kbp

scaffold N50

1Mbp

total coverage ~3x (Sanger)

92.1% unigenes mapped

235Mbp anchored (of this 161Mbp also oriented)

coverage 108.6x

contig N50 26.38 kbp

Scaffold N50 2.38 Mbp

genome covered 83.2%

~97% ESTs mapped

13.5x coverage

contig N50: 18.1kbp

scaffold N50: 4.677 Mbp

WGS

scaffold N50 1,140kbp

total coverage ~72.2 (Sanger + Ilumina)

96.8% unigenes mapped

72.8% of the genome anchored

Scaffold N50:47.8Mbp

Sanger coverage ~8x

WGS

955.1 Mbp assembled

454/Illumina/solid

39x coverage

WGS

scafold N50 1,542.7 (kbp??)

total coverage ~16.9x (Sanger + 454)

71.2% anchored

WGS

ca 99% ESTs mapped

215.9 Mbp in pseudomolecules

Contig N50:552.8 Kbp [phytozome]

WGS

>=95 % cDNA found

Contig N50 = 45.5 Kbp

Pseudomolecules spanning 91 scaffolds (760Mbp of which 594Mbp have been oriented )

over 98% ESTs mappable

contig N50: 5100bp

~40x coverage

79.2x coverage

contig N50: 31,429bp

scaffold N50: 1,318,511bp

105x coverage

contig N50: 6,506bp

scaffold N50: 44,298bp

63x coverage

contig N50: 16,480bp

scaffold N50:89,778bp

>93% unigenes found

scaffold N50: 79.7 kbp

194kbp superscaffolds using physical Nicotiana map

scaffold N50: 82.6 kb

166kbp superscaffolds using physical Nicotiana map

(a) cv. CM334 (b) cv. Zunla-1

(b) 35,336

(b) 2014

N50 scaffold: (a) 2.47 Mb (b) 1.23 Mb

N50 scaffold: 0.45 Mb

100x coverage

scaffold N50: 62.4Mbp

Sanger, 8.5x coverage

WGS

Roche 454/Illumina WGS

Illumina WGS

scaffold N50: 76kbp

Sanger, 4-6x coverage per BAC

N50 scaffold: 1.3 Mb

the genome from Galdieria sulphuraria has finally been published (Schönknecht, G., W.-H. Chen, et al. (2013). "Gene transfer from bacteria and archaea facilitated evolution of an extremophilic eukaryote." Science 339(6124): 1207-1210.) Genome size is 13.7 MB, and 6623 protein-coding genes were annotated.

Nakamura et al. published the genome sequence for Pyropia yezoensis (Nakamura, Y., N. Sasaki, et al. (2013). "The first symbiont-free genome sequence of marine red alga, Susabi-nori Pyropia yezoensis." PLoS ONE 8(3): e57122.).

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