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Leucine-rich repeat

2bnh topview.png
An example of a leucine-rich repeat protein, a porcine ribonuclease inhibitor
Identifiers
Symbol LRR_1
Pfam PF00560
Pfam clan CL0022
InterPro IPR001611
SCOP 2bnh
SUPERFAMILY 2bnh
OPM protein 1xwd
Leucine rich repeat variant
PDB 1lrv EBI.jpg
a leucine-rich repeat variant with a novel repetitive protein structural motif
Identifiers
Symbol LRV
Pfam PF01816
Pfam clan CL0020
InterPro IPR004830
SCOP 1lrv
SUPERFAMILY 1lrv
LRR adjacent
PDB 1h6u EBI.jpg
internalin h: crystal structure of fused n-terminal domains.
Identifiers
Symbol LRR_adjacent
Pfam PF08191
InterPro IPR012569
Leucine rich repeat N-terminal domain
PDB 1xec EBI.jpg
dimeric bovine tissue-extracted decorin, crystal form 2
Identifiers
Symbol LRRNT
Pfam PF01462
InterPro IPR000372
SMART LRRNT
SCOP 1m10
SUPERFAMILY 1m10
Leucine rich repeat N-terminal domain
PDB 1ogq EBI.jpg
the crystal structure of pgip (polygalacturonase inhibiting protein), a leucine rich repeat protein involved in plant defense
Identifiers
Symbol LRRNT_2
Pfam PF08263
InterPro IPR013210
SMART LRRNT
SCOP 1m10
SUPERFAMILY 1m10

A leucine-rich repeat (LRR) is a protein structural motif that forms an α/β horseshoe fold. It is composed of repeating 20–30 amino acid stretches that are unusually rich in the hydrophobic amino acid leucine. These repeats commonly fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Typically, each repeat unit has beta strand-turn-alpha helix structure, and the assembled domain, composed of many such repeats, has a horseshoe shape with an interior parallel beta sheet and an exterior array of helices. One face of the beta sheet and one side of the helix array are exposed to solvent and are therefore dominated by hydrophilic residues. The region between the helices and sheets is the protein's hydrophobic core and is tightly sterically packed with leucine residues.

Leucine-rich repeats are frequently involved in the formation of protein–protein interactions.

Leucine-rich repeat motifs have been identified in a large number of functionally unrelated proteins. The best-known example is the ribonuclease inhibitor, but other proteins such as the tropomyosin regulator tropomodulin and the toll-like receptor also share the motif. In fact, the toll-like receptor possesses 10 successive LRR motifs which serve to bind pathogen- and danger-associated molecular patterns.

Although the canonical LRR protein contains approximately one helix for every beta strand, variants that form beta-alpha superhelix folds sometimes have long loops rather than helices linking successive beta strands.


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Wikipedia

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